PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014699
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB
Protein Properties Length: 246aa    MW: 26779.3 Da    PI: 8.1335
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-8660PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.96.3e-20550147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ l ++v+++G+++W+++++t++ gR++k+c++rw + 
        Aan014699  5 KGPWSPEEDQMLQQLVEKHGPRNWSLVSKTIP-GRSGKSCRLRWCNQ 50
                     79******************************.***********985 PP
2Myb_DNA-binding569.1e-1859101347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde +++a++++G++ W+tIar +  gRt++ +k++w++ 
        Aan014699  59 PFTPEEDETILRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 101
                      89******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129428.228155IPR017930Myb domain
SuperFamilySSF466896.57E-33298IPR009057Homeodomain-like
SMARTSM007171.5E-14453IPR001005SANT/Myb domain
PfamPF002495.5E-19550IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.8E-26658IPR009057Homeodomain-like
CDDcd001671.31E-15749No hitNo description
SMARTSM007177.1E-1556104IPR001005SANT/Myb domain
PROSITE profilePS5129421.26557106IPR017930Myb domain
PfamPF002495.6E-1559101IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.5E-2359105IPR009057Homeodomain-like
CDDcd001673.84E-1259102No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MDRIKGPWSP EEDQMLQQLV EKHGPRNWSL VSKTIPGRSG KSCRLRWCNQ LCPQVEHRPF  60
TPEEDETILR AHARFGNKWA TIARLLSGRT DNAIKNHWNS TLKRKCCSMT NEEFNDFAIQ  120
QPLLKRSVSD GKVYPFPGFV LTPGSPSGSD VSDSSVRTNS SSHVYMAAAR PAAAAIVDDP  180
PTSLTLSLPG ADSSEASSAV PAPPAAAVAA PPAIDAEFLA VMQEMIRMEV RNYISGDGFR  240
VGGCGK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A3e-4141063105MYB PROTO-ONCOGENE PROTEIN
1mse_C2e-4141063105C-Myb DNA-Binding Domain
1msf_C2e-4141063105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022005508.11e-119transcription factor MYB44-like
SwissprotO231602e-84MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A2U1KRK01e-149A0A2U1KRK0_ARTAN; Myb domain protein 77
STRINGVIT_07s0129g01050.t011e-101(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.17e-69myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]