PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014833
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family HD-ZIP
Protein Properties Length: 184aa    MW: 21613.8 Da    PI: 7.665
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S56530630PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.15.3e-1793147256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                rk+ ++t+eq++ Lee+ + ++++++ +++eLAkkl+L  rq+ vWFqNrRa+ k
  Aan014833  93 RKKLKLTTEQITLLEEASKYHSTLNTGQKQELAKKLHLLPRQIEVWFQNRRARTK 147
                788899***********************************************98 PP
2HD-ZIP_I/II988.9e-3293171179
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeener 79 
                  +kk++l++eq++lLEe  + +++L++ +K+ela++L+l prq++vWFqnrRARtk+k++Ek+ye Lk+++++lk+en +
    Aan014833  93 RKKLKLTTEQITLLEEASKYHSTLNTGQKQELAKKLHLLPRQIEVWFQNRRARTKLKHIEKEYEWLKKCFETLKDENGS 171
                  69************************************************************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.2E-1574147IPR009057Homeodomain-like
SuperFamilySSF466892.48E-1581148IPR009057Homeodomain-like
PROSITE profilePS5007115.69489149IPR001356Homeobox domain
SMARTSM003898.5E-1391153IPR001356Homeobox domain
CDDcd000864.03E-1293150No hitNo description
PfamPF000465.7E-1493147IPR001356Homeobox domain
PROSITE patternPS000270124147IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
XVSLLGIDVE IKREKQLKQK RGVFGXDLAL PIHPKVEVTD HGDCEHKHDE EKDDHDSCSS  60
KTIDDLEEKE ERGEKRSDSS NFDVYHDNSG GSRKKLKLTT EQITLLEEAS KYHSTLNTGQ  120
KQELAKKLHL LPRQIEVWFQ NRRARTKLKH IEKEYEWLKK CFETLKDENG SYLRKSCKKF  180
DVFH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022037885.13e-70homeobox-leucine zipper protein HOX19-like
TrEMBLA0A251UQA97e-69A0A251UQA9_HELAN; Putative leucine zipper, homeobox-associated, Homeodomain-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22800.11e-30HD-ZIP family protein