PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014937
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Trihelix
Protein Properties Length: 250aa    MW: 28455.5 Da    PI: 10.1367
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-182160992PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix107.68.2e-3477162187
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                rW+k e+ aLi++r+ ++++++++  k+plWee+s++mr+ g++r++k+Ckekwen+nk+ykk+ke++kkr +e+s+tcpyf+ql+a
  Aan014937  77 RWPKAEINALIKLRTTLDTKYQESGPKGPLWEEISSAMRKLGYNRNAKRCKEKWENINKYYKKVKESSKKR-PEDSKTCPYFHQLDA 162
                8*********************************************************************8.99***********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007175.0E-574136IPR001005SANT/Myb domain
CDDcd122035.64E-3176141No hitNo description
PROSITE profilePS500907.14376134IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.5E-476134IPR009057Homeodomain-like
PfamPF138374.8E-2477163No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
XTVALMQQSQ PHQQQQPQPQ VQTQQQQPPQ QATLPLAVPL HVPIPVSVQA TTPPPPAVKN  60
LDNGSGGENM LQPSPSRWPK AEINALIKLR TTLDTKYQES GPKGPLWEEI SSAMRKLGYN  120
RNAKRCKEKW ENINKYYKKV KESSKKRPED SKTCPYFHQL DAIYREKAGS SSNNNSNINT  180
GFGVKPETQL AAPIMARPEQ QWPHPSAGAV QEPHQHQHPY QQQHQHQQQQ QQRQPQHQHQ  240
QQQQGKPNLD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023742465.11e-90trihelix transcription factor GT-2-like isoform X1
TrEMBLA0A141FQL41e-116A0A141FQL4_CHRMO; Trihelix protein (Fragment)
STRINGXP_009618661.15e-69(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.19e-50Trihelix family protein