PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015099
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 251aa    MW: 27928.1 Da    PI: 10.2571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-29951PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-1671117455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn+ Er+RRd+iN+++ +L++l+P+a      K +Ka++L +++eY+k+Lq
  Aan015099  71 VHNQSERKRRDKINQKMKTLQKLVPNA-----NKTDKASMLDEVIEYLKQLQ 117
                6*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.5E-1765127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.14E-1865130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.44767116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-1471117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.12E-1572120No hitNo description
SMARTSM003531.0E-1673122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
ERELGPKGFT STSTGSPENT VSGKQQSTKS TSPDEHDSVC HSRPQKNEVD EKKKGKGKSS  60
ISTKRSRAAA VHNQSERKRR DKINQKMKTL QKLVPNANKT DKASMLDEVI EYLKQLQGQI  120
NMINRMNMSP MMMPLAMQQQ QFQMAMMNPM GLGMGMGMGM GMPGVMDLNS ISANRPSIPG  180
MPPVFHPSNF MQPAMASWDM NTTSDQVPNH NDQMAAFLAC QSQPMTMEGY SRMAAMFQQM  240
QNQPTYPGLK N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17580ERKRRD
27681RKRRDK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.193210.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in stems and flowers. {ECO:0000269|PubMed:12679534}.
Functional Description ? help Back to Top
Source Description
UniProtRequired during the fertilization of ovules by pollen. {ECO:0000269|PubMed:15634699}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold treatment. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022002675.11e-117transcription factor UNE10-like
SwissprotQ8GZ388e-63UNE10_ARATH; Transcription factor UNE10
TrEMBLA0A2U1N1800.0A0A2U1N180_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGXP_002511647.12e-89(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.11e-49bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]