PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan015381

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

G2-like

Protein Properties

Length: 281aa MW: 31231.1 Da PI: 6.2438

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55106827	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-713160997	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.5e-34	19	73	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Aan015381 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 73 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.485	16	76	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.8E-32	18	74	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.45E-18	18	73	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.9E-26	19	74	IPR006447	Myb domain, plants
Pfam	PF00249	1.0E-9	21	72	IPR001005	SANT/Myb domain
Pfam	PF14379	1.4E-23	105	151	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence Send to blast
MDVVNGSNGL NNSSSLASKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT 60 IYHVKSHLQK YRLAKYLPDS SSEGKAFDQK ESGDMLSSLD GSSGMQITEA LKLQMEVQKR 120 LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ RLSGVLSETP ASEDNCLESK NITDPMTPAP 180 AFETPIMETA AKECVQVKNT SVDERGEPST PDSGCHMDSP IENQLGERSM KKQRVSASMS 240 MGMGLTHQIL ESSMRSPFHQ QQQSVYLTTE QFGHSSGINE D

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-23	19	76	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-23	19	76	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-23	19	76	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-23	19	76	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-23	19	76	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010647085.1	1e-144	PREDICTED: myb family transcription factor PHL7 isoform X1
Refseq	XP_010647087.1	1e-144	PREDICTED: myb family transcription factor PHL7 isoform X1
Refseq	XP_019074066.1	1e-144	PREDICTED: myb family transcription factor PHL7 isoform X1
Refseq	XP_024961610.1	1e-144	myb family transcription factor PHL7 isoform X1
Refseq	XP_024961611.1	1e-144	myb family transcription factor PHL7 isoform X1
Swissprot	Q9SJW0	1e-117	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2U1Q6B4	0.0	A0A2U1Q6B4_ARTAN; Uncharacterized protein
STRING	VIT_00s0475g00040.t01	1e-143	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-89	G2-like family protein