PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan015520

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

bHLH

Protein Properties

Length: 357aa MW: 39382.6 Da PI: 7.096

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S41952589	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-55289	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.1	5.4e-07	313	356	4	51
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y+ Aan015520 313 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYV 356 8*************************9....66699999999999996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.67E-12	307	356	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.31E-7	307	356	No hit	No description
Gene3D	G3DSA:4.10.280.10	8.1E-12	309	356	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.545	309	357	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence Send to blast
MSKDGFFNTL PQSWNSMFGM ELDSQVNEMN LFNHNWENSM DQSDPFESAL SSIVSSPVNS 60 HPGTGVRTPV PGCHAGGESV VLKELIGRLG SICNSGEISP ESCIHGNNTN NNSTNTSCYT 120 TPLNSPPKLN LSINHRNHHQ LPMIPSDPAF VERAARFSCF GAKEGEFQHM VESGKMSRVS 180 SNQSFIKTGG SVSRLSMNLN SDNKEVDHSV EVSSLSEQIN GSETGIKGRK RKVISKGKSK 240 ETQVDNKAVA ESEKEESDAK RSKSDEEGNG IEPEKEKEKT QGNQKQTKEN AKLPEPPKDY 300 IHVRARRGQA TDSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVX

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence Send to blast

MSKDGFFNTL PQSWNSMFGM ELDSQVNEMN LFNHNWENSM DQSDPFESAL SSIVSSPVNS  60
HPGTGVRTPV PGCHAGGESV VLKELIGRLG SICNSGEISP ESCIHGNNTN NNSTNTSCYT  120
TPLNSPPKLN LSINHRNHHQ LPMIPSDPAF VERAARFSCF GAKEGEFQHM VESGKMSRVS  180
SNQSFIKTGG SVSRLSMNLN SDNKEVDHSV EVSSLSEQIN GSETGIKGRK RKVISKGKSK  240
ETQVDNKAVA ESEKEESDAK RSKSDEEGNG IEPEKEKEKT QGNQKQTKEN AKLPEPPKDY  300
IHVRARRGQA TDSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVX

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Aan.20328	0.0	trichome

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023748688.1	1e-170	transcription factor bHLH62-like
TrEMBL	A0A2U1LGQ8	0.0	A0A2U1LGQ8_ARTAN; Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
STRING	XP_002516384.1	1e-112	(Ricinus communis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	8e-63	bHLH family protein