PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015822
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family HD-ZIP
Protein Properties Length: 293aa    MW: 33235.2 Da    PI: 4.3675
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41930219PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-3173PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.2e-1977131357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
   Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                k+++++++q++ Le+ Fe ++++  +++ +LAk lgL+ rq+ +WFqNrRa++k+
  Aan015822  77 KKRRLKADQVQFLEKSFETDNKLEPDRKIQLAKDLGLQPRQIAIWFQNRRARWKN 131
                566899***********************************************95 PP
2HD-ZIP_I/II122.52e-3976166191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  ekkrrl+++qv++LE+sFe+++kLep+rK +la++Lglqprq+a+WFqnrRAR+k+kqlEkdy++L+++y++lk++ e+L  e+e+L++++
    Aan015822  76 EKKRRLKADQVQFLEKSFETDNKLEPDRKIQLAKDLGLQPRQIAIWFQNRRARWKNKQLEKDYDVLQESYNELKANYENLLLEKEKLKSQV 166
                  69**************************************************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.14E-1963134IPR009057Homeodomain-like
PROSITE profilePS5007117.11972132IPR001356Homeobox domain
SMARTSM003891.4E-1975136IPR001356Homeobox domain
CDDcd000861.76E-1777133No hitNo description
PfamPF000463.2E-1677131IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.4E-2079140IPR009057Homeodomain-like
PRINTSPR000311.5E-5103112IPR000047Helix-turn-helix motif
PROSITE patternPS000270107130IPR017970Homeobox, conserved site
PRINTSPR000311.5E-5112128IPR000047Helix-turn-helix motif
PfamPF021832.0E-12132173IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MSARGFLYGG DSSGSGGGGS GFNSLFVPGS SHSFAGSRSM VSFEDKRNGS SGSFFRTVDQ  60
EDNGDDEYDE YFQHPEKKRR LKADQVQFLE KSFETDNKLE PDRKIQLAKD LGLQPRQIAI  120
WFQNRRARWK NKQLEKDYDV LQESYNELKA NYENLLLEKE KLKSQVLDLS DKLLLQEAEK  180
GTSDSSSTKS PSEALQQEQV TDYVNVQDVA SDSSSPKCVD GVQSFSERGD SSYLFEQDQS  240
DGSLDEEDNL EKMFVTPLSG YLLPKIENCD YPEHFLGLFP NHDQDQSFGF WSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681KKRRLK
2124132RRARWKNKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.81120.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021983942.11e-151homeobox-leucine zipper protein HAT5-like
TrEMBLA0A2U1P4Y00.0A0A2U1P4Y0_ARTAN; HD-ZIP protein
STRINGPOPTR_0015s07640.18e-97(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.17e-35homeobox 1