PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan016079

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

bZIP

Protein Properties

Length: 327aa MW: 36379 Da PI: 8.9825

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-315160996	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.2e-10	40	84	2	46
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++ k rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Aan016079 40 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLSQLEQELQ 84 567899*************************98888887776654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.7E-8	36	86	No hit	No description
SMART	SM00338	2.7E-7	39	102	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.473	41	85	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.4E-7	42	83	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.66E-7	43	86	No hit	No description
PROSITE pattern	PS00036	0	46	61	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	9.9E-30	126	200	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MAELSPMTDT STDGDIDDKA LGFRNGSLGL VVSDASDKSR DQKTLRRLAQ NREAARKSRL 60 RKKAYVQQLE SSRMKLSQLE QELQRARQQG VYISSSGEQS QSTSGNGASS FHVEYSRWLD 120 EQNRRISELR EAVNSHAGDA ELKLIVDGVI VHFDDIFRIK GDAAKADVFH ILSGMWKTPA 180 ERCFLWLGGF RSSEILKLLI TQLEPLTEQQ LLAINNLQQT SQQAEDALSQ GMDALQQSLS 240 ETLAGSLGPS GSSGNVANYM GQMAMAMGKL GTLEGFIRQA DNLRQQTLQQ MHRILTTRQS 300 ARALIAISDY FSRLRALSSL WLARPRE

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Aan.2945	0.0	leaf

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021998898.1	0.0	transcription factor TGA2.2-like
Swissprot	Q41558	1e-179	HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBL	A0A2U1L795	0.0	A0A2U1L795_ARTAN; Basic-leucine zipper domain, Transcription factor TGA like domain protein
STRING	Migut.F00128.1.p	0.0	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	1e-135	TGACG motif-binding factor 6