PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016132
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family HD-ZIP
Protein Properties Length: 167aa    MW: 19647.8 Da    PI: 9.2186
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S56467274PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-9993PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.41.4e-191164356
               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                R +ft++q+  Le ++e ++ p  +++ +LA+klgL  rqV +WFqN+Ra+ k
  Aan016132 11 GRKRFTDKQISFLEYMYETQSRPELRMKHQLANKLGLHPRQVAIWFQNKRARSK 64
               6999************************************************99 PP
2HD-ZIP_I/II103.12.3e-3312101392
  HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ++r++++q+++LE ++e++++ e + K++la++Lgl+prqva+WFqn+RAR k++q+E++y++Lk++y++l+ + e+L+ke+++L ++l+
    Aan016132  12 RKRFTDKQISFLEYMYETQSRPELRMKHQLANKLGLHPRQVAIWFQNKRARSKSRQIEQEYNTLKHNYETLALKSESLKKENQALLSQLE 101
                  79************************************************************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.19E-17667IPR009057Homeodomain-like
PROSITE profilePS5007116.876666IPR001356Homeobox domain
SMARTSM003898.8E-15870IPR001356Homeobox domain
PfamPF000465.8E-171164IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.2E-171273IPR009057Homeodomain-like
CDDcd000863.52E-131267No hitNo description
PRINTSPR000315.5E-53746IPR000047Helix-turn-helix motif
PROSITE patternPS0002704164IPR017970Homeobox, conserved site
PRINTSPR000315.5E-54662IPR000047Helix-turn-helix motif
PfamPF021831.8E-1167105IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MAEARKNKNE GRKRFTDKQI SFLEYMYETQ SRPELRMKHQ LANKLGLHPR QVAIWFQNKR  60
ARSKSRQIEQ EYNTLKHNYE TLALKSESLK KENQALLSQL EMLRSVAERH QEDTRRHDST  120
GNSSGEESDD RVTNSPTKSD ANVMLENYSK EIDVPFYDSV AYFEDGK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.47720.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024993578.12e-97homeobox-leucine zipper protein ATHB-12-like
SwissprotP468976e-33ATHB7_ARATH; Homeobox-leucine zipper protein ATHB-7
TrEMBLA0A2U1Q8G31e-119A0A2U1Q8G3_ARTAN; HD-ZIP protein
STRINGMigut.E00626.1.p7e-38(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.12e-35homeobox 7
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]