PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016709
Common NameERF4
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 122aa    MW: 13857.7 Da    PI: 10.7127
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55182568PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-71205PU_refplantGDBView CDS
PUT-183a-Artemisia_annua-71206PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-203180255
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrd ++    ++r +lg+f+tae+Aa+a++aa+ +l+g
  Aan016709 31 HYRGVRKRP-WGRYAAEIRDpWK----KTRRWLGTFDTAEDAARAYDAAAFALRG 80
               69*******.**********883....5999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.58E-233190IPR016177DNA-binding domain
PROSITE profilePS5103223.6833188IPR001471AP2/ERF domain
SMARTSM003807.9E-393194IPR001471AP2/ERF domain
PfamPF008471.2E-123180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-323189IPR001471AP2/ERF domain
CDDcd000183.72E-183190No hitNo description
PRINTSPR003677.9E-113243IPR001471AP2/ERF domain
PRINTSPR003677.9E-115470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MAIIFGDTTP NDQSLVQSPT TRSPPSLKQF HYRGVRKRPW GRYAAEIRDP WKKTRRWLGT  60
FDTAEDAARA YDAAAFALRG SKAKMNFPAS FYPSESGTSD RKIRTTTEKA VLFDLNLPAP  120
MW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-233195570ATERF1
3gcc_A1e-233195570ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.202710.0trichome
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023766548.19e-41ethylene-responsive transcription factor 3-like
SwissprotQ9FE677e-30ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLM4IXJ72e-69M4IXJ7_ARTAN; Ethylene-responsive transcription factor 4
STRINGPOPTR_0011s05570.12e-30(Populus trichocarpa)
STRINGXP_004493753.11e-30(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-22ERF domain protein 12
Publications ? help Back to Top
  1. Lu X, et al.
    AaORA, a trichome-specific AP2/ERF transcription factor of Artemisia annua, is a positive regulator in the artemisinin biosynthetic pathway and in disease resistance to Botrytis cinerea.
    New Phytol., 2013. 198(4): p. 1191-202
    [PMID:23448426]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]
  4. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]