PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016972
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family LBD
Protein Properties Length: 133aa    MW: 14656 Da    PI: 4.6512
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55107961PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-145223PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26026.22.2e-089921090
     DUF260 10 rkCakdCvlapyfpaeqp..kkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleql 90
                +C++dC++ ++fp e+p  ++ + ++  F  + + + l ++  +++++ +++ +v   ear + P +G +g+++++qq l ++
  Aan016972  9 GECPPDCPFLEVFPVESPfkSRQELIETGFNINFIKECLLQAkTPDDQKLIIRGMVISCEARKKYPFEGDAGIFRAYQQSLVKK 92
               58*************995559999************98877736666999*****************************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031954.6E-6992IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MPCVVCPDGE CPPDCPFLEV FPVESPFKSR QELIETGFNI NFIKECLLQA KTPDDQKLII  60
RGMVISCEAR KKYPFEGDAG IFRAYQQSLV KKEGLMKELF LLKDKCQALI DKGNVAAAED  120
AVGKGLPTDD AAA