PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016995
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Trihelix
Protein Properties Length: 291aa    MW: 33463.1 Da    PI: 10.2317
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-121588PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.17.2e-16235290156
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwen 56 
                rW+k+ev+aLi +r  + +r+  + +k+  We+v++ +++ g++r+pk+Ckekw++
  Aan016995 235 RWPKSEVQALISVRAALSQRFDGKGSKGSIWEDVAAELSSMGYNRTPKKCKEKWDK 290
                8*****************************************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.5E-12234290No hitNo description
Gene3DG3DSA:1.10.10.601.2E-4235291IPR009057Homeodomain-like
CDDcd122031.10E-18235290No hitNo description
PROSITE profilePS500907.828235291IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MEMFAGDHGL QNDVVLYPDT HLAPFTSDHH KITIIPPQPP QKLRPIRSNV RTVHEPQPMT  60
WQPDVGFYDN SESGFGSPDP KDSNLGLLSK ACQNQAALRS SPDESSKSQE ATNEPVNKKR  120
KRKRKSRKRL KSLIKRMMDT VMEKQERMHN ELIEILEKKE NESIMREEAW KKQEIERAKM  180
NEQARSQEIS RSLALISFIQ NTLGQEVQTP KPHNALNLVK KGENKKEEKL KFDARWPKSE  240
VQALISVRAA LSQRFDGKGS KGSIWEDVAA ELSSMGYNRT PKKCKEKWDK H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117122KKRKRK
2118124KRKRKRK
3119124RKRKRK
4119127RKRKRKSRK
5122130KRKSRKRLK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024988511.11e-116trihelix transcription factor GTL1
TrEMBLA0A2U1MU060.0A0A2U1MU06_ARTAN; Trihelix protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.19e-28Trihelix family protein