PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan017097
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family TALE
Protein Properties Length: 98aa    MW: 11767.7 Da    PI: 10.6172
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-29785PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.84.2e-0953872155
               HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
   Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
               k +yp++e++++L +++gL+ +q+ +WF N+R +e
  Aan017097 53 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKRE 87
               469*****************************986 PP
2ELK31.73.5e-11728122
        ELK  1 ELKhqLlrKYsgyLgsLkqEFs 22
               ELKh+L+++Y+++++++++E++
  Aan017097  7 ELKHELKQGYKEKIVDIREEIL 28
               9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF037891.3E-7728IPR005539ELK domain
PROSITE profilePS512139.969727IPR005539ELK domain
SMARTSM011886.1E-4728IPR005539ELK domain
PROSITE profilePS5007111.3212790IPR001356Homeobox domain
SMARTSM003893.6E-102994IPR001356Homeobox domain
SuperFamilySSF466898.98E-172988IPR009057Homeodomain-like
CDDcd000862.69E-93087No hitNo description
Gene3DG3DSA:1.10.10.602.3E-253487IPR009057Homeodomain-like
PfamPF059209.9E-194786IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MERVRQELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT TSLLKAWWQS HSKWPYPTEE  60
DKARLVQETG LQLKQINNWF INQRKREIGT VILHPPLL
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Maximally expressed in sepals, petals and fully expanded leaves. Also expressed in other flower organs and in developing leaves. Low level expression in stem internodes.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028104354.12e-56homeobox protein knotted-1-like 3 isoform X1
SwissprotO041364e-55KNAP3_MALDO; Homeobox protein knotted-1-like 3
TrEMBLA0A0B2Q1W02e-55A0A0B2Q1W0_GLYSO; Homeobox protein knotted-1-like 4
TrEMBLA0A445IZ026e-55A0A445IZ02_GLYSO; Homeobox protein knotted-1-like 3 isoform B
STRINGCagra.0628s0006.1.p2e-55(Capsella grandiflora)
STRINGPOPTR_0006s27560.12e-55(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.21e-57KNOTTED1-like homeobox gene 3