PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan017401
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family GeBP
Protein Properties Length: 233aa    MW: 26292 Da    PI: 4.9518
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41960878PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-699160996PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731011e-31127227298
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgkepsfskehdqkifelskkiWg 97 
                lfqrl+seeDe+v+L+ +id+k+++g      d+++fye+v+k + +++s+ qlv+K+rrLKkKf+++  +   +k+ k +sfs++++++ +elsk +Wg
  Aan017401 127 LFQRLFSEEDELVILKNMIDYKNENGItGEITDMSGFYEIVRKLLRVDFSRAQLVDKVRRLKKKFNNNAVRelkKKNRKGISFSRSNEREGYELSKLLWG 226
                79************************966677***********************************98887767888999******************9 PP

     DUF573  98 s 98 
                s
  Aan017401 227 S 227
                5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.7E-26128226IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MAKNRQPDTL PPPPSSDEEE DDTGSEEEQS SGPESDEDSP PNPKQPQKTQ SDDSESDGSD  60
DDSQANVPTV IIKPISSKPM KNDNQSNPDA KTAKKDVPDK KRKNSEEPEK EAKKAKKTDE  120
EDSKKPLFQR LFSEEDELVI LKNMIDYKNE NGITGEITDM SGFYEIVRKL LRVDFSRAQL  180
VDKVRRLKKK FNNNAVRELK KKNRKGISFS RSNEREGYEL SKLLWGSGAS SSI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024983975.11e-48STOREKEEPER protein-like
TrEMBLA0A2U1KU391e-160A0A2U1KU39_ARTAN; DNA-binding storekeeper protein-related transcriptional regulator
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.18e-21DNA-binding storekeeper protein-related transcriptional regulator