PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan017655
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family NAC
Protein Properties Length: 333aa    MW: 38193 Da    PI: 4.2529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-375160988PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1189.1e-3729932128
        NAM  32 evikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                ++i evd+yk++P++Lp  +k+k+++++w+fFs+rd++y++g r++rat +gyWkatgkd+++++ k++ vg kktLv+y+grap+g +tdWvmhey++
  Aan017655   2 DIIGEVDVYKWDPEELPgqSKLKSGDRQWFFFSPRDRRYPNGARSSRATMNGYWKATGKDRTIKR-KSSSVGNKKTLVYYQGRAPSGLRTDWVMHEYTM 99 
                5799************964489999***************************************9.8999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100543.5971122IPR003441NAC domain
SuperFamilySSF1019411.44E-422122IPR003441NAC domain
PfamPF023652.6E-142298IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MDIIGEVDVY KWDPEELPGQ SKLKSGDRQW FFFSPRDRRY PNGARSSRAT MNGYWKATGK  60
DRTIKRKSSS VGNKKTLVYY QGRAPSGLRT DWVMHEYTMD EEELRRCPYA QDHYVLYKVF  120
KKSGPGPKNG EQYGAPFVEE EWSDDDCLDV ETLLVQKLQP IPVNDFKSAR EEEAPLSNDD  180
IEFLHRIIEP EVLPPLPQIT EKAKMGLEPE PQPLVVEEDF LEMNDLLGPE PEKCSFDSLS  240
EFDFYQEADA FGSQHFELQP AYMDNLEFGP ANSGLVSEVV NHDNDELQMS YDLWNHDQGE  300
SSITTSYQNV SQVSSGVVIE ENPGKLEYNV NQX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-35112846171NO APICAL MERISTEM PROTEIN
1ut4_B3e-35112846171NO APICAL MERISTEM PROTEIN
1ut7_A3e-35112846171NO APICAL MERISTEM PROTEIN
1ut7_B3e-35112846171NO APICAL MERISTEM PROTEIN
3swm_A3e-35112849174NAC domain-containing protein 19
3swm_B3e-35112849174NAC domain-containing protein 19
3swm_C3e-35112849174NAC domain-containing protein 19
3swm_D3e-35112849174NAC domain-containing protein 19
3swp_A3e-35112849174NAC domain-containing protein 19
3swp_B3e-35112849174NAC domain-containing protein 19
3swp_C3e-35112849174NAC domain-containing protein 19
3swp_D3e-35112849174NAC domain-containing protein 19
4dul_A3e-35112846171NAC domain-containing protein 19
4dul_B3e-35112846171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024977297.11e-175NAC domain-containing protein 17-like isoform X1
TrEMBLA0A2U1KFL10.0A0A2U1KFL1_ARTAN; Uncharacterized protein
STRINGVIT_18s0001g01820.t015e-91(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.13e-79NAC domain containing protein 17