PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan018435

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

NAC

Protein Properties

Length: 416aa MW: 45702.8 Da PI: 4.6546

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55097180	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-90695	PU_ref	plantGDB	View CDS
PUT-183a-Artemisia_annua-90696	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149.6	1.6e-46	10	136	3	129
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 pGfrFhPtd elvv+yLkkkv gkk+ +v++ev+iy++ PwdL+ k ++k+++ ew+fF++++kky++g+r+nrat+ g+Wkatgkd++v+ +g++v Aan018435 10 PGFRFHPTDVELVVYYLKKKVLGKKIIG-NVVAEVNIYDYSPWDLRdKsALKNGDLEWFFFCPKSKKYNSGSRSNRATEIGFWKATGKDRNVTY-RGRTV 107 9**********************888.89**********85346777888***********************************.9999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrle 129 + ktLvf+ g+a kge+tdWvmheyrle Aan018435 108 ATIKTLVFHIGHAGKGERTDWVMHEYRLE 136 ***************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	6.28E-54	7	158	IPR003441	NAC domain
PROSITE profile	PS51005	49.808	8	158	IPR003441	NAC domain
Pfam	PF02365	7.9E-25	10	135	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence Send to blast
MARSSLFPVP GFRFHPTDVE LVVYYLKKKV LGKKIIGNVV AEVNIYDYSP WDLRDKSALK 60 NGDLEWFFFC PKSKKYNSGS RSNRATEIGF WKATGKDRNV TYRGRTVATI KTLVFHIGHA 120 GKGERTDWVM HEYRLEDEEL ANAGVVQDTY VLLKLFEKAG SGQKXGAQYG APFNEEEWED 180 DDIASCSNAL AAVGPLEAAT TTNPLGYKQK GPATVNMYEP GSSTVTCSAN GATVNMYEPG 240 SSTVTCSANG AGNVAHYKQK STAPIGMMAA PQITHNVCLS EPQSSIVALC ANERHEEVPV 300 GDDDIMSLED IAFLLGVSED FTGNNTNEVV EVQNVEKNDT MAPNADDGFY NELVNLINLD 360 EFNGGASASG SKPALYMFDK PLDDLDFNLG TFYVDDKNRK QEPEAKNRKQ ELEALI

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence Send to blast

MARSSLFPVP GFRFHPTDVE LVVYYLKKKV LGKKIIGNVV AEVNIYDYSP WDLRDKSALK  60
NGDLEWFFFC PKSKKYNSGS RSNRATEIGF WKATGKDRNV TYRGRTVATI KTLVFHIGHA  120
GKGERTDWVM HEYRLEDEEL ANAGVVQDTY VLLKLFEKAG SGQKXGAQYG APFNEEEWED  180
DDIASCSNAL AAVGPLEAAT TTNPLGYKQK GPATVNMYEP GSSTVTCSAN GATVNMYEPG  240
SSTVTCSANG AGNVAHYKQK STAPIGMMAA PQITHNVCLS EPQSSIVALC ANERHEEVPV  300
GDDDIMSLED IAFLLGVSED FTGNNTNEVV EVQNVEKNDT MAPNADDGFY NELVNLINLD  360
EFNGGASASG SKPALYMFDK PLDDLDFNLG TFYVDDKNRK QEPEAKNRKQ ELEALI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-42	10	164	19	171	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-42	10	164	19	171	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-42	10	164	19	171	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-42	10	164	19	171	NO APICAL MERISTEM PROTEIN
3swm_A	2e-42	10	164	22	174	NAC domain-containing protein 19
3swm_B	2e-42	10	164	22	174	NAC domain-containing protein 19
3swm_C	2e-42	10	164	22	174	NAC domain-containing protein 19
3swm_D	2e-42	10	164	22	174	NAC domain-containing protein 19
3swp_A	2e-42	10	164	22	174	NAC domain-containing protein 19
3swp_B	2e-42	10	164	22	174	NAC domain-containing protein 19
3swp_C	2e-42	10	164	22	174	NAC domain-containing protein 19
3swp_D	2e-42	10	164	22	174	NAC domain-containing protein 19
3ulx_A	2e-42	10	164	17	174	Stress-induced transcription factor NAC1
4dul_A	2e-42	10	164	19	171	NAC domain-containing protein 19
4dul_B	2e-42	10	164	19	171	NAC domain-containing protein 19
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023757610.1	1e-129	NAC domain-containing protein 82-like
Refseq	XP_023757611.1	1e-129	NAC domain-containing protein 82-like
TrEMBL	A0A2U1PZY1	0.0	A0A2U1PZY1_ARTAN; NAC domain-containing protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	2e-65	NAC domain containing protein 103