PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan018953

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Trihelix

Protein Properties

Length: 531aa MW: 61728 Da PI: 6.1909

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55056299	PU_unref	Unigene	View CDS
gnl\|UG\|Aan#S55107211	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-85115	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37	9.1e-12	107	156	2	56
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwen 56 W+++ev +L++++++ e+++r+ W++vs+k++e g+++s+++Ckek+e+ Aan018953 107 WSDDEVIQLLRIKSSSENWFRDF-----TWDHVSRKLAEMGYKKSAEKCKEKFEE 156 *******************98.....9**********************96 PP
2	trihelix	91.3	1e-28	399	497	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+++evlaLi++r+++++ ++ ++ + We++s+ m e g++rs+k+Ckekwen+nk+++k+k+++kkr s +s+tcpy+++l Aan018953 399 RWPRDEVLALINIRSNVNNGIGGSSeehqignnkvgssiVGGSIWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDTNKKR-SLDSRTCPYYHELS 497 8************9999998665567777788998888899*************************************8.9999*****996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	6.0E-9	105	160	No hit	No description
PROSITE profile	PS50090	5.691	106	158	IPR017877	Myb-like domain
Pfam	PF13837	4.0E-18	398	498	No hit	No description
CDD	cd12203	3.08E-21	398	477	No hit	No description
PROSITE profile	PS50090	6.388	399	470	IPR017877	Myb-like domain

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence Send to blast
MFDGVPVEQF HQFISTPSTR IPPNPSLIPT PPISTSTSLN FLSFDPMLFH PQLPTPPPPP 60 PPHHHHHHQA LFQSNPFLRP PTRDQYNGSE GKVDQEIDLG VNINDSWSDD EVIQLLRIKS 120 SSENWFRDFT WDHVSRKLAE MGYKKSAEKC KEKFEEETCR SFSSTIGYNK NSGRYLISEE 180 LDEHLYNNAE ENTHHHGTNA PPEINVNHQE QLQVHEREVE VETNIEDKGQ EGQFEKDPNE 240 IMVQPTQEDE EVTKGKKRKR KHKKFKMVQG LCVDLVNKMM AQQEEMHQRL LEDMATRDEE 300 KIKREEAWRK EEMERVEREI HVREREQEMA RDRQSTITEF LNKITSSDQK IQLPFEMNLQ 360 DLQTNVTNIQ NPMPLSEMTK MPSLENQDRL TTKDEIGKRW PRDEVLALIN IRSNVNNGIG 420 GSSEEHQIGN NKVGSSIVGG SIWERISQGM LELGYKRSAK RCKEKWENIN KYFRKTKDTN 480 KKRSLDSRTC PYYHELSKLY NQEKQASLSN SPGLSSEEQE NCTVAKIMPG N

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence Send to blast

MFDGVPVEQF HQFISTPSTR IPPNPSLIPT PPISTSTSLN FLSFDPMLFH PQLPTPPPPP  60
PPHHHHHHQA LFQSNPFLRP PTRDQYNGSE GKVDQEIDLG VNINDSWSDD EVIQLLRIKS  120
SSENWFRDFT WDHVSRKLAE MGYKKSAEKC KEKFEEETCR SFSSTIGYNK NSGRYLISEE  180
LDEHLYNNAE ENTHHHGTNA PPEINVNHQE QLQVHEREVE VETNIEDKGQ EGQFEKDPNE  240
IMVQPTQEDE EVTKGKKRKR KHKKFKMVQG LCVDLVNKMM AQQEEMHQRL LEDMATRDEE  300
KIKREEAWRK EEMERVEREI HVREREQEMA RDRQSTITEF LNKITSSDQK IQLPFEMNLQ  360
DLQTNVTNIQ NPMPLSEMTK MPSLENQDRL TTKDEIGKRW PRDEVLALIN IRSNVNNGIG  420
GSSEEHQIGN NKVGSSIVGG SIWERISQGM LELGYKRSAK RCKEKWENIN KYFRKTKDTN  480
KKRSLDSRTC PYYHELSKLY NQEKQASLSN SPGLSSEEQE NCTVAKIMPG N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	255	260	KKRKRK
2	255	263	KKRKRKHKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021969292.1	0.0	trihelix transcription factor GTL2
TrEMBL	A0A2U1KU43	0.0	A0A2U1KU43_ARTAN; Trihelix protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	4e-72	Trihelix family protein