PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan019070
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 191aa    MW: 21245.3 Da    PI: 9.3921
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41899253PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-96710PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.5e-052345123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               y+C+ C + F++   L  H+++H
  Aan019070 23 YTCTFCRREFRSAQALGGHMNVH 45
               9********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.76E-62050No hitNo description
Gene3DG3DSA:3.30.160.608.0E-42148IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.00662345IPR015880Zinc finger, C2H2-like
PfamPF139121.3E-52346IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.1572350IPR007087Zinc finger, C2H2
PROSITE patternPS0002802545IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
XEVKAFAEDT GNIMGTTWPP RSYTCTFCRR EFRSAQALGG HMNVHRRDRA RLHQAQPNFK  60
NPNLPSPSSS TLLINPTQEL VANGGLCLLY SLPNPNVIFN HSSLDNELGN HSSFLSITPH  120
PSTENFMNFQ ASFGTRSFNS SLSSFSNTKT STSTNFQRPQ KDSLDNKRKK TDSTIEGIDL  180
ELRLGCNSRA S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1njq_A8e-141845229superman protein
2l1o_A8e-141845229Transcriptional regulator SUPERMAN
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.187520.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023736264.17e-93transcriptional regulator SUPERMAN-like isoform X2
RefseqXP_023736265.11e-93transcriptional regulator SUPERMAN-like isoform X3
TrEMBLA0A2U1NLG01e-135A0A2U1NLG0_ARTAN; Zinc finger C2H2-type/integrase DNA-binding domain-containing protein
STRINGevm.model.supercontig_239.12e-53(Carica papaya)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.17e-28C2H2 family protein