PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan019085

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

G2-like

Protein Properties

Length: 228aa MW: 25940.7 Da PI: 7.5994

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-89865	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103	1.8e-32	80	133	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+e+LGG+ekAtPk++l+lm+v gL+++hvkSHLQ+YR+ Aan019085 80 PRLRWTPELHHAFVNAIERLGGQEKATPKSVLQLMNVRGLSIAHVKSHLQMYRS 133 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.3E-31	76	134	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.355	76	136	IPR017930	Myb domain
SuperFamily	SSF46689	1.56E-15	78	134	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-24	80	135	IPR006447	Myb domain, plants
Pfam	PF00249	1.8E-9	81	132	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence Send to blast
MSGDLDMLES NEENSFDQYG ENTSSISSIN KHVTSFDLNE EASSQDNNDL SVEDDERAEE 60 GSSSKNRKGP VRQYVRSKMP RLRWTPELHH AFVNAIERLG GQEKATPKSV LQLMNVRGLS 120 IAHVKSHLQM YRSKKLDDSG QVLSHRATTM TQGRPHIYSN LYSRSSPFEH LKLANGGIVL 180 ASNLEEGNHH SRRHLHESTF RPTHSIQHLL SRHQQWLSNQ SLMSSTRE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-18	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-18	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-18	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-18	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-18	81	135	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022017258.1	1e-131	two-component response regulator ARR18-like
Refseq	XP_022017259.1	1e-131	two-component response regulator ARR18-like
Refseq	XP_022017260.1	1e-131	two-component response regulator ARR18-like
TrEMBL	A0A2U1Q384	1e-158	A0A2U1Q384_ARTAN; Myb domain, Homeodomain-like protein
STRING	GLYMA08G12320.2	2e-60	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-37	G2-like family protein