PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan019191
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Dof
Protein Properties Length: 218aa    MW: 24656.9 Da    PI: 9.6842
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55031804PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-89160992PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof109.41.8e-342511261
     zf-Dof 12 dstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
               ds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk +
  Aan019191  2 DSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGT 51
               79*********************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088425.62150IPR003851Zinc finger, Dof-type
PfamPF027013.6E-28249IPR003851Zinc finger, Dof-type
ProDomPD0074784.0E-21248IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
XDSSNTKFCY YNNYNLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKG TTIVSTVGKP  60
MSANGKLKAV VSSELGKSAF INGFEHDFNH NPILWSGPPQ TSHLLSLLRA TQNPNPNPNF  120
ASNSLNHLKD QNFMVDQNMG SLGFESLGQT SSLGLCSSLW RNNQVNQQAQ QNHHEQQQHQ  180
QQGIMNNNHE VENNENNRYQ RLRSSSPVNF YHHDQTHS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024978592.11e-121dof zinc finger protein DOF3.7-like
TrEMBLA0A2U1P9681e-154A0A2U1P968_ARTAN; DOF transcription factor 15
STRINGVIT_00s0253g00060.t014e-64(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-29TARGET OF MONOPTEROS 6