PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan019228
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 301aa    MW: 33584.2 Da    PI: 7.968
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41943934PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-222160995PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.12e-15246755
               HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
               + E+rRR++iN++f+ Lrel+P+     ++K +Ka+ L +++eYI+ Lq
  Aan019228  2 ATEQRRRSKINDRFSMLRELIPHG----DQKRDKASFLLEVIEYIQFLQ 46
               57*********************7....7*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003535.2E-13151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.243145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-20266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-12246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.28E-16270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.37E-13450No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
XATEQRRRSK INDRFSMLRE LIPHGDQKRD KASFLLEVIE YIQFLQEKVH KFEDSCRGWP  60
NEQPAMTPWN NNQRPTEGFI DQPRVQNGVS GSALPYASKL NENKHSVALN LPKKDHQNIL  120
DSDLSSLETM KDIGQHPRLT NLASPFPSPL QPNVYSPGCG STSVAAPPPS TLPSDTTNTP  180
SQLWQSRSCT TDCTVAGDKS KDQDLTIESG TISISTIYSQ GLLSTLTQAL QSSGVDLSEA  240
NISVQIDLGK RANTSRRDSS TPIFKKNEAP VIDENLTRSR LASTREEKND YDLKRFKTSR  300
Y
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023767110.11e-161transcription factor BIM1 isoform X1
TrEMBLA0A2U1MRX00.0A0A2U1MRX0_ARTAN; Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
STRINGVIT_17s0000g04790.t011e-102(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-36BES1-interacting Myc-like protein 2