PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan019356

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Trihelix

Protein Properties

Length: 379aa MW: 43127.3 Da PI: 4.699

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55102863	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-130442	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.1	1.7e-16	145	229	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L+ea ++ + +r++l+ W+ev++++ + ++ers qC+++++ l+k+ykk+k++ ++ + ++ s+++yf++++ Aan019356 145 WTEHETFVLLEAWGDRFLQCGRKSLRSEEWQEVADRVsQVSKMERSDSQCRNRLDTLKKKYKKEKANING-SRGVNSKWVYFKKMD 229 ***********************************555788******************98886.689999******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.1E-22	144	231	No hit	No description
PROSITE profile	PS50090	6.353	145	202	IPR017877	Myb-like domain

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence Send to blast
MDGEREDSKY AVNYGTNQGY GSMQVPKGLV RNVPYTQSQM VTKYEDDDEV EDEEEEQEPE 60 EERNVGDNEV NGSAHQIGVD DDDEDDDDGN NGINNSVNMQ RHPKKRKLKS LLLSYELAPR 120 VPPVTPAPTS GRKYSYGGRN TLTDWTEHET FVLLEAWGDR FLQCGRKSLR SEEWQEVADR 180 VSQVSKMERS DSQCRNRLDT LKKKYKKEKA NINGSRGVNS KWVYFKKMDM LLSSSIQQAG 240 SVSRGVDSRE NVFRNPSVPL SITNGVDESR DSAGNSESQE GDDDSDLLPP KKLKSVSDRN 300 SGSSFKLLAD SINKFSKIYE RIENSKIQQM IELEKMRMDF QRDLEMQKRQ ILDRAQSEIS 360 KVRQGNYDDN DVSAENVSG

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence Send to blast

MDGEREDSKY AVNYGTNQGY GSMQVPKGLV RNVPYTQSQM VTKYEDDDEV EDEEEEQEPE  60
EERNVGDNEV NGSAHQIGVD DDDEDDDDGN NGINNSVNMQ RHPKKRKLKS LLLSYELAPR  120
VPPVTPAPTS GRKYSYGGRN TLTDWTEHET FVLLEAWGDR FLQCGRKSLR SEEWQEVADR  180
VSQVSKMERS DSQCRNRLDT LKKKYKKEKA NINGSRGVNS KWVYFKKMDM LLSSSIQQAG  240
SVSRGVDSRE NVFRNPSVPL SITNGVDESR DSAGNSESQE GDDDSDLLPP KKLKSVSDRN  300
SGSSFKLLAD SINKFSKIYE RIENSKIQQM IELEKMRMDF QRDLEMQKRQ ILDRAQSEIS  360
KVRQGNYDDN DVSAENVSG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024970439.1	1e-165	trihelix transcription factor ASIL2-like
TrEMBL	A0A2U1PP36	0.0	A0A2U1PP36_ARTAN; Trihelix protein
STRING	cassava4.1_009108m	1e-127	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-63	Trihelix family protein