PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan019428

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Trihelix

Protein Properties

Length: 323aa MW: 36281 Da PI: 9.5664

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-146452	PU_unref	plantGDB	View CDS
PUT-183a-Artemisia_annua-765160988	PU_ref	plantGDB	View CDS
PUT-183a-Artemisia_annua-765160989	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.5	6.4e-17	18	108	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt++e l+Liea+re++ +l r+ l+ p+W++v++k+ + +++ qC++k+e+l++r++++k+++ + + s++ yf+ +e Aan019428 18 CWTRDEALVLIEAYRERWYALHRAFLRNPDWDAVAEKVttacPDVTPPKTSAQCRHKMEKLRQRHRAEKQRAASFpGGRFFSSWFYFEAME 108 8***********************************8877778889999********************984467778999999997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	3.1E-16	17	109	No hit	No description
CDD	cd00167	0.0023	19	78	No hit	No description
PROSITE profile	PS50090	6.655	19	79	IPR017877	Myb-like domain
SMART	SM00595	1.2E-5	26	115	IPR006578	MADF domain

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
MSTTVATVKP TRKFPPPCWT RDEALVLIEA YRERWYALHR AFLRNPDWDA VAEKVTTACP 60 DVTPPKTSAQ CRHKMEKLRQ RHRAEKQRAA SFPGGRFFSS WFYFEAMETL ENGPGSEPGS 120 GPNDPNTNSG QPGLNPGRGI RFKPSGVGNN LVTLAANNAY VNNWGNQEDG DDDGNYVIDG 180 TNLYKNSGYV GGIRAKPVIP VAARKVRKVD EEGEMWVKMP RDTNSYQGNN VNESYNPGLK 240 QGMKRGETGI DEVVASIKML GDGFMKMEKM KIDMAREIER MRMDSEMKRN QLILESQKQI 300 VDAFVKGLIE TRKRPRGETV ADS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024994485.1	1e-166	uncharacterized protein LOC112527873
TrEMBL	A0A2U1QHY9	0.0	A0A2U1QHY9_ARTAN; Trihelix protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	3e-36	Trihelix family protein