PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan019471
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bZIP
Protein Properties Length: 356aa    MW: 37925.6 Da    PI: 5.4747
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41973000PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-12621PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_179.63.7e-25262324163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN++L++el++l++e++kl+se+
  Aan019471 262 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVEALSSENHSLRDELQRLSEECEKLTSEN 324
                89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.6E-27192IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.3E-21259322No hitNo description
PfamPF001703.2E-22262324IPR004827Basic-leucine zipper domain
SMARTSM003381.0E-23262326IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.61264327IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.13E-12265321No hitNo description
CDDcd147022.72E-25267317No hitNo description
PROSITE patternPS000360269284IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MGGGEESSPA KNSKPDQVQE PAPPSYADWS SSMQAYYGPG GTPPFFASTM ASPTPHPYMW  60
GGQHPMMSPY GTPVPYPALY PPAGVYAHPS MPMTPSTAPP NTEMEAKAYE GKEKATSKKS  120
KGTSGNGNVR TGESGKAASS SGNDGATQSA DSGSDGSSDG SDENDQHGYS GGKKGSFNQM  180
LADASAQNNN SGPNIQTPVP GNPVGAMPGT NLNMGMDLWN PSAANGPMKM RPNPSGVART  240
AVPPPMIGRD GMMPDQWGQQ DERELKRQKR KQSNRESARR SRLRKQAECE ELQARVEALS  300
SENHSLRDEL QRLSEECEKL TSENSSIKDE LTRFCGPEAV SKLEAHLESR ADEGNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1278284RRSRLRK
2278285RRSRLRKQ
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Found in both light and dark grown leaves.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter (PubMed:1373374). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:1373374, ECO:0000269|PubMed:22718771}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024974049.10.0G-box-binding factor 1-like isoform X1
RefseqXP_024974050.10.0G-box-binding factor 1-like isoform X1
RefseqXP_024974051.10.0G-box-binding factor 1-like isoform X1
RefseqXP_024974052.10.0G-box-binding factor 1-like isoform X1
RefseqXP_024974053.10.0G-box-binding factor 1-like isoform X1
SwissprotP427741e-107GBF1_ARATH; G-box-binding factor 1
TrEMBLA0A2U1MII70.0A0A2U1MII7_ARTAN; G-box binding factor 1
STRINGXP_008440691.11e-162(Cucumis melo)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-94G-box binding factor 1
Publications ? help Back to Top
  1. Gangappa SN,Srivastava AK,Maurya JP,Ram H,Chattopadhyay S
    Z-box binding transcription factors (ZBFs): a new class of transcription factors in Arabidopsis seedling development.
    Mol Plant, 2013. 6(6): p. 1758-68
    [PMID:24157607]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Karumuri S,Bandopadhyay R
    In silico analysis of the structure and interaction of COP1 protein of Arabidopsis thaliana.
    Indian J. Biochem. Biophys., 2014. 51(5): p. 343-9
    [PMID:25630103]
  4. Smykowski A,Zimmermann P,Zentgraf U
    CORRECTION. G-Box Binding Factor1 Reduces CATALASE2 Expression and Regulates the Onset of Leaf Senescence in Arabidopsis.
    Plant Physiol., 2016. 170(2): p. 1164-7
    [PMID:26826725]
  5. Smykowski A,Fischer SM,Zentgraf U
    Phosphorylation Affects DNA-Binding of the Senescence-Regulating bZIP Transcription Factor GBF1.
    Plants (Basel), 2015. 4(3): p. 691-709
    [PMID:27135347]
  6. Giri MK, et al.
    GBF1 differentially regulates CAT2 and PAD4 transcription to promote pathogen defense in Arabidopsis thaliana.
    Plant J., 2017. 91(5): p. 802-815
    [PMID:28622438]