PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020124
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB
Protein Properties Length: 695aa    MW: 78300.2 Da    PI: 9.0768
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S54982389PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-20160997PU_refplantGDBView CDS
PUT-183a-Artemisia_annua-529160989PU_unrefplantGDBView CDS
PUT-183a-Artemisia_annua-77424PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72e-16429476148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+WT+eEd++l+ +++ +G g+W++ ++  g+ R++k+c++rw +yl
        Aan020124 429 KGAWTKEEDDRLIAYIRTHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 476
                      79******************************99************97 PP
2Myb_DNA-binding56.46.7e-18482526147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T++Edel+++++ +lG++ W++Ia +++ gRt++++k++w+++
        Aan020124 482 RGNFTEDEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 526
                      89********************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF478747.99E-1012305No hitNo description
Gene3DG3DSA:1.10.220.103.7E-191373IPR018502Annexin repeat
PfamPF001913.9E-161679IPR018502Annexin repeat
PRINTSPR001961.1E-332547IPR001464Annexin
SMARTSM003358.7E-122880IPR018502Annexin repeat
PRINTSPR001961.1E-336581IPR001464Annexin
Gene3DG3DSA:1.10.220.102.0E-1774152IPR018502Annexin repeat
PfamPF001913.4E-1187150IPR018502Annexin repeat
SMARTSM003352.4E-499151IPR018502Annexin repeat
Gene3DG3DSA:1.10.220.109.9E-24159236IPR018502Annexin repeat
PfamPF001911.4E-18169235IPR018502Annexin repeat
PRINTSPR001961.1E-33174200IPR001464Annexin
SMARTSM003352.3E-14183235IPR018502Annexin repeat
Gene3DG3DSA:1.10.220.104.3E-25237306IPR018502Annexin repeat
PfamPF001912.8E-19245305IPR018502Annexin repeat
PRINTSPR001961.1E-33254274IPR001464Annexin
SMARTSM003351.5E-14258311IPR018502Annexin repeat
PRINTSPR001961.1E-33282297IPR001464Annexin
Gene3DG3DSA:1.10.10.602.4E-23420479IPR009057Homeodomain-like
PROSITE profilePS5129416.629424476IPR017930Myb domain
SMARTSM007171.2E-13428478IPR001005SANT/Myb domain
SuperFamilySSF466899.73E-29428523IPR009057Homeodomain-like
PfamPF002498.8E-15429476IPR001005SANT/Myb domain
CDDcd001672.09E-10431476No hitNo description
PROSITE profilePS5129428.821477531IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.6E-27480531IPR009057Homeodomain-like
SMARTSM007172.5E-17481529IPR001005SANT/Myb domain
PfamPF002494.1E-16482526IPR001005SANT/Myb domain
CDDcd001672.82E-12484527No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005509Molecular Functioncalcium ion binding
GO:0005544Molecular Functioncalcium-dependent phospholipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MSTLTVPPVL SSPRDDAMHL YKAFKGLGCD TAAVVNILAH RDASQRALIE NEYRTMYHEE  60
LTKRLSSELS GNVKKAVLLW MPDPARRDAM ILHDALTTDI DLKEATEVIC SRTPSQIQYL  120
KQLYHQLYGT YIEHAIQAQA SGDLEQLLLA YLSTPRSEGL EVDRTMADHD AKALFKAGEK  180
RLGTDEKTFR VIFSGRSRAH MAAVSSAYHN MYGSSLKKAV KGETSGNFEH ALVTILQCAE  240
NPGKYFAKVM HRAMKGLGTN DKTLTRVIVT RTEIDMQYIK AEYYKKHHKS LNDAVHSETS  300
GHYRHLPSFT LGPKSALGSR FWRLAYCKDS GSIFSVCVPE XGCSLXVFQL DFGYGEMLVK  360
KSSMLKSVLC SVVMVTFLEM WKFTSKKMNL PLFVFLFLSP QKHTKIGKFK EESLNMGRSP  420
CCEKAHTNKG AWTKEEDDRL IAYIRTHGEG CWRSLPKAAG LLRCGKSCRL RWINYLRPDL  480
KRGNFTEDED ELIIKLHSLL GNKWSLIAGR LPGRTDNEIK NYWNTHIRRK LLNRGIDPAT  540
HRPVTDHPTT PTTTSTTVTT TVNNHNVTSP PPPDIISFAT TKTAHVKNEE MEEDTKLNIT  600
SPDHQKQERC PDLNLELRIG PPQHHSSNMI PSISYMQQPL MTGGTICFAC SLGVQDNKEC  660
RCSANATSGN NNNNVGFDFF KIKNGALDYR SLEMK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6b3i_A3e-67530646342Annexin
6b3i_B3e-67530646342Annexin
6b3i_C3e-67530646342Annexin
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.67710.0trichome
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.15e-95myb domain protein 4