PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020263
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 232aa    MW: 25657.8 Da    PI: 10.199
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-692160995PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.7e-31166223359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +d  ++++tYegeHnh+
  Aan020263 166 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLDDSAMLIVTYEGEHNHT 223
                9************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.4E-15118162IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-33152224IPR003657WRKY domain
PROSITE profilePS5081129.666159222IPR003657WRKY domain
SuperFamilySSF1182908.11E-27162223IPR003657WRKY domain
SMARTSM007745.3E-38164224IPR003657WRKY domain
PfamPF031063.5E-27166222IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MNALPLSNHK PSLELSLVGK NSVQIGNPQQ NGGANTNYQF LQHNHQLQLK QQAEMMYRRS  60
NSGINLNFDN AGCTPTISSN RSFMSSLSMD GSVTTLDGSS FHLIGSTRST DQGSQQHKPR  120
CSARGEDGSV KCGSSGRCHC KKRKHRVKRS IKVPAVSNKL ADIPPDEYSW RKYGQKPIKG  180
SPHPRGYYKC SSMRGCPARK HVERCLDDSA MLIVTYEGEH NHTRVPSQSA NT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-22157226775WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021987406.11e-151probable WRKY transcription factor 21
SwissprotO043369e-89WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A2U1MHZ71e-173A0A2U1MHZ7_ARTAN; Protein WRKY1
STRINGXP_006479579.11e-114(Citrus sinensis)
STRINGPOPTR_0002s04440.11e-114(Populus trichocarpa)
STRINGXP_006443899.11e-114(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.15e-71WRKY DNA-binding protein 21