PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020285
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 215aa    MW: 23355.4 Da    PI: 6.5313
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55109064PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-418160988PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.1e-1198145455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Aan020285  98 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 145
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.10E-992149No hitNo description
SuperFamilySSF474594.45E-1892163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-1894163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.82894144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-898145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10100150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
XVTEQSGNGG RNXKRDGNYE DETSLLVSTS SANDLSNLSG KRMKISGLKD ESGGLKVDGE  60
GSSGSGSKAA AAEQSSKQSE PPKDYIHVRA RRGQATDSHS LAERARREKI SERMKILQDL  120
VPGCNKVIGK ALVLDEIINY IQSLQHQVEF LSMKLEAVNT RMNSPIEGFS TKELGPPPFD  180
AAGLLFGSQA ARDYGQESQS EWLHMQLGSS YERAT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021983964.11e-127transcription factor bHLH79 isoform X2
SwissprotQ69WS31e-77BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A251U0D41e-124A0A251U0D4_HELAN; Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein
STRINGEMJ106541e-100(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-70BIG PETAL P