PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020286
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Trihelix
Protein Properties Length: 164aa    MW: 18584.8 Da    PI: 4.4887
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55011101PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-147734PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.81.4e-132503986
   trihelix 39 rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
               +ergf +sp+qC++k+++lnkryk+++++ +k+ +++++++  ++++++
  Aan020286  2 MERGFYVSPQQCEDKFNDLNKRYKRVNDILGKGiACKVVENQTLLESMD 50
               79*******************************89********999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.4E-10275No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
XMERGFYVSP QQCEDKFNDL NKRYKRVNDI LGKGIACKVV ENQTLLESMD IPKKLKEEAK  60
KLLNSKHLFF REMCAYHTNS CGGGTSGASG VAHHSSPPEV TTTANQRQIC VHSNDDDADD  120
DNDEGDDDVD EDEDDCEHFE EEDDGLSSRK RGRTMENDVM RVRX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024984251.13e-56trihelix transcription factor GTL1
TrEMBLA0A2U1LFW81e-61A0A2U1LFW8_ARTAN; Sequence-specific DNA binding transcription factor
STRINGXP_008367432.13e-51(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.14e-38sequence-specific DNA binding transcription factors