PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020335
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB_related
Protein Properties Length: 259aa    MW: 28855.2 Da    PI: 6.3447
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41924207PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-126068PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.9e-086302348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia++++  Rt++++k++w+++l
        Aan020335  6 RWAAIASYLP-QRTDNDIKNYWNTHL 30
                     5*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.876134IPR017930Myb domain
SuperFamilySSF466891.25E-7536IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-12636IPR009057Homeodomain-like
CDDcd001674.61E-6630No hitNo description
PfamPF002497.8E-7630IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
XGKFYRWAAI ASYLPQRTDN DIKNYWNTHL KKKLNKIQGG NSCDHESHHR SRGSNSSSSS  60
ESAMSKGKWE RRLQTDIHMA KQALCEALSI DNKSINLPKI SSSIRTNSNS QIHQETAVPP  120
PSQISHSSNT YASSAENIAR LLPNWMNKPQ KSSQTSSESI STTQTHGSFD GQFSSPPSEG  180
LQHGINNNHS NNNYSNISDV SQSVSPDTSL FQDESKPNIQ DEQLPPLSFL EKWLLDDATA  240
QEQEDSLMDL SLEETNGLF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.201660.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expression in flowers increases as the flowers develop. {ECO:0000269|PubMed:1840903}.
UniprotTISSUE SPECIFICITY: Expressed in flowers, leaves and weakly in seed pods. {ECO:0000269|PubMed:1840903}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000305}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023743355.11e-113myb-related protein 306-like
SwissprotP813924e-48MYB06_ANTMA; Myb-related protein 306
TrEMBLA0A2U1L0U21e-180A0A2U1L0U2_ARTAN; Myb protein
STRINGXP_008239949.12e-57(Prunus mume)
STRINGEMJ104751e-57(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62470.11e-37myb domain protein 96
Publications ? help Back to Top
  1. Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C
    Expression patterns of myb genes from Antirrhinum flowers.
    Plant Cell, 1991. 3(2): p. 115-25
    [PMID:1840903]