PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020695
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 310aa    MW: 34187.7 Da    PI: 6.731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41935853PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-26160988PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.6e-093380354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +  rE++RRdr+N+ f eL + l +      +K +Ka+iL  +++ +++L
  Aan020695 33 LQKADREKQRRDRLNEQFTELGKTLDPE----RPKFDKATILGDTIQMLNDL 80
               56779*******************9987....69*************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-142799IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-1328102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.93E-82885No hitNo description
PROSITE profilePS5088813.2433080IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-73380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-73686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MDDSKFHLVP FDNNNNNTII QSRPGPEPKD RKLQKADREK QRRDRLNEQF TELGKTLDPE  60
RPKFDKATIL GDTIQMLNDL TAQVSRLKSE YTTLTEESRE LTQEKHDLRE EKASLKSDIE  120
SLNLQYQQRV RAMYPWGHMD QSVVMHPTSY PYPVPMQMPM PPGSIPMHPS IQPYPFFGSQ  180
NPGVVSNPGS AFFPPVQYVS PVVQTSTRSQ VSSRQGSRNK SSEQGENGSG KDGDSNDVAT  240
ELELKTPGST GDQDGSPGHS KPKKLHRKET SFSDENSASG CASSGTVQAS SSTSVIGGAN  300
GDHQRSASPP
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022021551.11e-174transcription factor bHLH121
SwissprotQ9LT233e-76BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A2U1NZU30.0A0A2U1NZU3_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGXP_009783164.11e-113(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-72bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]