PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021097
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family HB-other
Protein Properties Length: 170aa    MW: 20011.4 Da    PI: 4.9329
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-100940PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.72.6e-1051881954
               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
               Fe   ++yps +++  LA+++gL+ +qV++WF N R +
  Aan021097 51 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 88
               665559******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007112.4222992IPR001356Homeobox domain
SMARTSM003891.2E-93296IPR001356Homeobox domain
CDDcd000864.92E-123293No hitNo description
SuperFamilySSF466892.61E-183399IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.7E-303598IPR009057Homeodomain-like
PfamPF059204.6E-194988IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
XDTRHQGSKC WNKASDNKEH SIKWGMMEPE AWRPQRGLPE RSVNILRAWL FEHFLHPYPS  60
DADKHLLARQ TGLSRNQVSN WFINARVRLW KPMVEEMYQQ ESKEEGDQNN SPPQQDEEDQ  120
DNNDDEHQEH QEHDTRYNTF RDNTMNVDDH QSSPSSVAAM TTSNDNTSCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-183896563Homeobox protein Meis2
3k2a_B6e-183896563Homeobox protein Meis2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020241722.13e-55LOW QUALITY PROTEIN: BEL1-like homeodomain protein 4
TrEMBLA0A2U1P1902e-93A0A2U1P190_ARTAN; TALE protein
STRINGBra010577.1-P2e-54(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-53BEL1-like homeodomain 2