PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021211
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family NAC
Protein Properties Length: 423aa    MW: 47633 Da    PI: 4.776
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41891451PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-81715PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM130.21.5e-40211616128
        NAM  16 veyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgr 112
                ++yL+ k++g++ e+ ++i+evd++k ePwdLp  + +++ ++ew+fF+++d+ky++g+r+nrat sgyWkatgkd++++++ +++++g kktLvfy+gr
  Aan021211   2 NHYLRLKINGHDKEV-SCIREVDVCKKEPWDLPdlSVIESIDNEWFFFCPKDRKYQNGQRSNRATVSGYWKATGKDRTIKTSrGSNVIGKKKTLVFYTGR 100
                59**********999.89**************96447788899************************************99867788************* PP

        NAM 113 apkgektdWvmheyrl 128
                apkge+t+Wv+hey +
  Aan021211 101 APKGERTHWVIHEYCA 116
                **************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100546.0631139IPR003441NAC domain
PfamPF023653.6E-162115IPR003441NAC domain
SuperFamilySSF1019411.44E-452139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
XNHYLRLKIN GHDKEVSCIR EVDVCKKEPW DLPDLSVIES IDNEWFFFCP KDRKYQNGQR  60
SNRATVSGYW KATGKDRTIK TSRGSNVIGK KKTLVFYTGR APKGERTHWV IHEYCATEKE  120
LDGTHPGQSP YVLCRLFKKH DVKEDNGESF DVVDADQSYA SPPSVVKSSP EDVQSEPVTP  180
VVTDQLTGHP SNNGSLKMEN SEGNNDPMHY LYCPPTQFDI DQINYEMQPD MDLEKALEGF  240
WDASPEQHFD SKIFSPLHSQ MHSELGSTYM NNYGMVNSGN EHNGMQNQYG TNGMDFLETF  300
MVESDQFSYD DSGYKDGSVA QISIPEVHVK DHEYSSESDG EVIQVQAASR DFAFDQSYIL  360
QSAKPEENPV FHIRPKEDSP SSSGSNIAFA SNSDNNNFDT GIIIRSRPQR AGPTINNSQG  420
TAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-34314033166NO APICAL MERISTEM PROTEIN
1ut4_B7e-34314033166NO APICAL MERISTEM PROTEIN
1ut7_A7e-34314033166NO APICAL MERISTEM PROTEIN
1ut7_B7e-34314033166NO APICAL MERISTEM PROTEIN
3swm_A8e-34314036169NAC domain-containing protein 19
3swm_B8e-34314036169NAC domain-containing protein 19
3swm_C8e-34314036169NAC domain-containing protein 19
3swm_D8e-34314036169NAC domain-containing protein 19
3swp_A8e-34314036169NAC domain-containing protein 19
3swp_B8e-34314036169NAC domain-containing protein 19
3swp_C8e-34314036169NAC domain-containing protein 19
3swp_D8e-34314036169NAC domain-containing protein 19
4dul_A7e-34314033166NAC domain-containing protein 19
4dul_B7e-34314033166NAC domain-containing protein 19
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.9880.0leaf| trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023768569.10.0NAC domain-containing protein 91
TrEMBLA0A2U1MQD00.0A0A2U1MQD0_ARTAN; TCV-interacting protein
STRINGXP_009608176.11e-105(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.21e-78TCV-interacting protein