PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021231
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 334aa    MW: 36263.8 Da    PI: 8.4852
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41929059PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-136440PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH536.2e-17121167455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn  ErrRRdriN+++  L+el+P++      K++Ka++L +A+eY+k Lq
  Aan021231 121 VHNLSERRRRDRINEKMRALQELIPNC-----SKVDKASMLDEAIEYLKTLQ 167
                6*************************9.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.1E-20114175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.571117166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.28E-21120194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.50E-18120171No hitNo description
PfamPF000101.9E-14121167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.9E-18123172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
RVRQPNLDSV GVGSNPFVSK PLNEPHSVEK SSNVVLDVNG AKGVQETVKS NEPVVATSSV  60
CSGNSAERAS NDFSKNSKRK SRDTEEFECQ SQDVDEESLG TKTASASRGG TGSKRSRAAE  120
VHNLSERRRR DRINEKMRAL QELIPNCSKV DKASMLDEAI EYLKTLQLQV QIMSMGSGLC  180
MSPMMFPGGM HPHFSPMGIG MGMGYGIGMG MEMNQYGHPN MFQFPPNAQG SRHPLPSPTV  240
YGHPSQGMPM LFPQTPMPRV PMHPAARPVD VAPSSKDPMQ TKNSHAMTQL SNQSQDAHKT  300
LNQSTLVDKK DQGLEAGCST AGIDLSYKRN SDSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125130ERRRRD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.206280.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023742572.11e-140transcription factor PIF3-like
TrEMBLA0A2U1LYU60.0A0A2U1LYU6_ARTAN; Basic helix-loop-helix leucine zipper transcription factor
STRINGVIT_14s0060g00260.t011e-79(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-52phytochrome interacting factor 3