PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan021570
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 201aa    MW: 22671.7 Da    PI: 5.4381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55030046PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-7378PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12.1e-0547811554
               HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
        HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
               +++++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Aan021570 47 EVKDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 81
               6899***********66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.883281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.88E-63581No hitNo description
SMARTSM003539.5E-54187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-94593IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-94695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MPGLQGVTVE PEXPEAGQFN IGKNGKNSKV EGQPSKNLMD REKEKEEVKD RLSMLRSIVP  60
KISKMDRTSI LGDTIDYMKE LIEKIKHMQE EMAISSNDQL NSLNAKPKET YIRNSPKFDV  120
ERRNTDTRVQ VCCTGKPELL ISTMTTLETF GLEIHQCVIS CFNDFAMKAS CSEEMEHGLI  180
IESDDIKQAL FRNAGYGGKC L
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Broadly expressed. {ECO:0000269|PubMed:17088607}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024977267.11e-102transcription factor bHLH93-like
SwissprotQ9LSL12e-71BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A2U1Q8W31e-128A0A2U1Q8W3_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGXP_010275502.13e-86(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.16e-73beta HLH protein 93
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Sharma N, et al.
    NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis.
    Development, 2016. 143(4): p. 682-90
    [PMID:26758694]
  4. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]
  5. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]