PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn001931
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 240aa    MW: 26948.1 Da    PI: 6.1733
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn001931genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like20.31.2e-061842125
     G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                k+rl+W+ eLH+ F +av+qL G++
  Achn001931 18 KERLKWNDELHDLFEKAVNQLWGPD 42
                68*******************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.4E-51743IPR009057Homeodomain-like
PfamPF143791.8E-6161183IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MPSRASRSFD SDTGFSGKER LKWNDELHDL FEKAVNQLWG PDSKFKNHNY GIIWFCLYLI  60
MDANVISHGQ GTAQAANKDI IGTQVTEHNT AQAEVTGKHW RKNNKVTVEV PSASEASKLE  120
VDDDCDDPHA LIAFQFSSYM EEEYSSVCKN KVEKYLGGTT VKVQRRLKLK IEAQGKYLER  180
IQEDLNNIIN NTAKQGKAFS PISLLSLCEK SESNTRESES DLEIDKAKAM SKEESHAPK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6R8D96e-53A0A2R6R8D9_ACTCH; Myb family transcription factor