PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn005091
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 248aa    MW: 27480.1 Da    PI: 8.5973
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn005091genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.9e-1658108256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr +   ++Wv+e+r+p++   + r++lg+f  +e+Aa+a++ a+++l+ge
  Achn005091  58 IYRGVRLKN-CNKWVCEVREPKK---KSRIWLGTFPCPEMAARAYDVAALALRGE 108
                 69****665.8*********854...6**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-1157108IPR001471AP2/ERF domain
CDDcd000185.77E-2957117No hitNo description
SMARTSM003801.6E-2858121IPR001471AP2/ERF domain
PROSITE profilePS5103220.48158115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-2858117IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-2058117IPR016177DNA-binding domain
PRINTSPR003671.4E-95970IPR001471AP2/ERF domain
PRINTSPR003671.4E-997117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MNLEDESSPY SSSSSSSSTF CNVTKNPSSP STPTNVSLPT FHKRKAGRKK FKETRHPIYR  60
GVRLKNCNKW VCEVREPKKK SRIWLGTFPC PEMAARAYDV AALALRGEMA KLNFPDSTTL  120
LPRAKSSSTN DIQMAVLEAT RDFQLTIPSP STCSSQSSRG TSLTNLTRPR STHIPHEVSE  180
DSSIKSANDS KKVLDSSETF VDEEALFNMP GLLDSMAEGL LLTPPAMKRG FNWDAMDCDM  240
DMTLWRD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243826.11e-80PREDICTED: dehydration-responsive element-binding protein 1B-like
TrEMBLA0A2R6PR481e-179A0A2R6PR48_ACTCH; Dehydration-responsive element-binding protein like
STRINGXP_010243826.16e-80(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-40C-repeat-binding factor 4