PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn014781
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 149aa    MW: 16421 Da    PI: 8.4671
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn014781genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.42.5e-164322755
     G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Achn014781  4 ATPKSVLELMNVKDLTLAHVKSHLQMYRT 32
                9***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.2E-6333IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-11432IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.6E-14433IPR009057Homeodomain-like
PRINTSPR004631.3E-57087IPR002401Cytochrome P450, E-class, group I
SuperFamilySSF482641.31E-1577147IPR001128Cytochrome P450
Gene3DG3DSA:1.10.630.101.7E-1678147IPR001128Cytochrome P450
PfamPF000674.2E-1278146IPR001128Cytochrome P450
PRINTSPR003851.3E-78198IPR001128Cytochrome P450
PRINTSPR004631.3E-590116IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.3E-5133148IPR002401Cytochrome P450, E-class, group I
PRINTSPR003851.3E-7134145IPR001128Cytochrome P450
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0005506Molecular Functioniron ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MTGATPKSVL ELMNVKDLTL AHVKSHLQMY RTVKSTDKAT GNECSSQDDI RVVVFHLRWI  60
REGDIPVLEV YAVSRRAVIL GGSDTTTGML TWAISLLLNN QAALKKAQEG LDLHEGVDGK  120
LMIQTSKNRV YLEAIIKETL RLYPADPS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2834722e-39KP283472.1 Prunus armeniaca aberrant testa shape (ATS) gene, complete cds.
GenBankKP2834732e-39KP283473.1 Prunus incisa isolate 462-2010A aberrant testa shape (ATS) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018846687.16e-23PREDICTED: cytochrome P450 82C4-like
TrEMBLA0A2I4GS121e-21A0A2I4GS12_JUGRE; cytochrome P450 82C4-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24682355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.21e-17G2-like family protein