PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn022601
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 204aa    MW: 22655.3 Da    PI: 5.7554
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn022601genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.12.9e-09647243
         NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykve 43
                p+Gf F+Ptd+e +++yL kk  g++l+l+ vi+++d+y+ e
  Achn022601  6 PVGFLFRPTDKEFIKHYLLKKQIGEELPLNGVIQKLDVYSEE 47
                89***************************999******9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.81E-103101IPR003441NAC domain
PfamPF023651.1E-4661IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MAITFPVGFL FRPTDKEFIK HYLLKKQIGE ELPLNGVIQK LDVYSEEVLS KSSDYVVCLL  60
EKKERVIKQK NMQSKKNAGG ALVNLTSGVD MWINKRMRLC EEKNQRIEQL LMKCTIEAST  120
TTFPHGLIVM NVHENEVVMN TLAMPSPVYA LPVTVIESAP IAQQVTPIYG ESGFESMVNA  180
ENVVATDTLA TLQPSASYNL SES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6S2221e-148A0A2R6S222_ACTCH; NAC transcription factor 47 like