PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn023151
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 192aa    MW: 21539.2 Da    PI: 8.4709
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn023151genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-0829522347
                     -HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                     +W+ Ia +++ gRt++++k++w++ 
       Achn023151 29 RWSMIAGRLP-GRTDNEIKNYWNTN 52
                     6*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001671.44E-62053No hitNo description
PROSITE profilePS500906.4232153IPR017877Myb-like domain
SuperFamilySSF466891.79E-72661IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-112853IPR009057Homeodomain-like
PfamPF002497.3E-62953IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MNIRITVIGY VNYWIVSISD RQLSDNHARW SMIAGRLPGR TDNEIKNYWN TNLGKKVHDH  60
HTTPSTPSNS NHRKIRRKPK IEPQPKISES NVVRTKAIRC SKVFNIISPQ PNKAQPMKAM  120
DTPTTNPLEL SPYNGVLSPS PEEDNPLDAN LGDAWLSDLL NSDFSGWFSN DTVGDWTENI  180
FLQPNMVSGG D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022754800.16e-30transcription factor TT2-like
TrEMBLA0A2R6S2A81e-115A0A2R6S2A8_ACTCH; Anthocyanin regulatory C1 protein
STRINGGLYMA13G16890.14e-27(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.14e-16MYB family protein