PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn027091
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 127aa    MW: 14074.9 Da    PI: 10.4349
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn027091genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-1782126250
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                  y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+
  Achn027091  82 IYHGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAA 126
                 69****998.**********843...6*******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.4E-1281126IPR001471AP2/ERF domain
CDDcd000183.79E-2481126No hitNo description
SMARTSM003802.8E-1882126IPR001471AP2/ERF domain
PROSITE profilePS5103219.7782126IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-2482126IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1782126IPR016177DNA-binding domain
PRINTSPR003675.1E-108394IPR001471AP2/ERF domain
PRINTSPR003675.1E-10105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MEEQINIESL AQDYLPSSPT TTTTSSSTTT TTTTTSSSFS STSDSLKSCK AQKSLKRVLQ  60
EAKNGKESRK KHKIGVDCKH PIYHGVRMRN WGKWVSEIRE PRKKSRIWLG TYPTAEMAAR  120
AHDVAA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028051115.13e-51ethylene-responsive transcription factor ERF034
TrEMBLA0A2R6RCU96e-57A0A2R6RCU9_ACTCH; Ethylene-responsive transcription factor
STRINGEMJ199984e-31(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-30ERF family protein