PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn030751
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family C2H2
Protein Properties Length: 420aa    MW: 45534.9 Da    PI: 9.6671
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn030751genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00024185207223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +C++Cg+ F  ++  + H  + H
  Achn030751 185 TCHKCGEQFAKWEAVEAHHLSkH 207
                 7*****************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280186207IPR007087Zinc finger, C2H2
SuperFamilySSF563993.74E-20209418No hitNo description
Gene3DG3DSA:3.90.228.101.2E-7226398IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MPAVWFALKR SLHCRSEPSE VHDPKVNNGN LSNILTKKSG GGGRSGCSRS ISNLKDVIHG  60
SKRYMEKPPT CSPRSIGSSE FLNPITHEVV FSDSTCEIKI TGVGGAFQES SSCHGGGSGG  120
SSAFGGTLKL GTPGPGGHNH SHTGSSTVPR NTARSFSRKE VSGINGVPSN PRGTFRKDSL  180
GFTSTCHKCG EQFAKWEAVE AHHLSKHAVT ELVEGDSSRK IVELICRTGW SKSDNNYGNI  240
ERILKVHNMQ KTIARFEEYR EMVKIKASKL QKKHPRCLAD GNELLRFYGM TVECPLGTNG  300
SSSLCLSDRC NVCRILRHGF SAKKELKGGI VGVFTTSTSG RALESIELRD DNSILRKALI  360
VCRVIAGRVH RPLENFQELT SQSGFDSLAG KMGLCSNIEE LFLLSPRALL PCFVVIFKP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028098178.10.0uncharacterized protein LOC114297898
TrEMBLA0A2R6RAY90.0A0A2R6RAY9_ACTCH; Zinc finger, C2H2 protein
STRINGXP_010267823.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22442235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-118C2H2 family protein