PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn044861
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 211aa    MW: 22862.2 Da    PI: 4.5552
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn044861genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.1e-194293155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++k+ g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  Achn044861 42 PVYRGVRRRKSGGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALRG 93
                68*******************9.....4489************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-124293IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-2943103IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-2143103IPR016177DNA-binding domain
SMARTSM003803.1E-3543107IPR001471AP2/ERF domain
PROSITE profilePS5103222.82743101IPR001471AP2/ERF domain
PRINTSPR003672.1E-94455IPR001471AP2/ERF domain
CDDcd000181.04E-3044103No hitNo description
PRINTSPR003672.1E-983103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MQHLLYNLMY HSSNTSSCGS GRSDTVLCQS DLGSARVSGK HPVYRGVRRR KSGGKWVSEI  60
REPRSPNRIW LGTFPTPEMA AVAYDVAALA LRGSEAELNF PNSASSLPVP ASTAARDIQM  120
AAASAAAAAG AAVDAFSGSR NDDQDKYGTS QQSEDPIRYN EFVDEDLIFD MPNVLVNMAQ  180
GMLLSPPRYD FADEDTGDEN TEDQNLWKFS *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1431102273Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028069670.13e-75ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR09e-57ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2R6PXP11e-140A0A2R6PXP1_ACTCH; Ethylene-responsive transcription factor
STRINGXP_009353175.14e-73(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-47ERF family protein