PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn047821
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 146aa    MW: 15927.3 Da    PI: 5.585
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn047821genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM26.41.9e-0897143247
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdL 47 
                 p Gf+F+P+d+el+ + L kkv+g++l+++e  i+e+d++ k ePw++
  Achn047821  97 PYGFKFSPEDHELI-YILFKKVNGNSLPVDEGlIEECDLFgKEEPWEI 143
                 89************.889********9998777****9883559*986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-790144IPR003441NAC domain
PROSITE profilePS5100512.17996145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MGLLRLCTVG AWWRFGGFGC SGGTVAVVCD GAWYEGAGGR EGEKLLVRFL SRTSSYQMAV  60
PVPSRIQAAH QNHQMALPVP LVPSPVQASH QMALSIPYGF KFSPEDHELI YILFKKVNGN  120
SLPVDEGLIE ECDLFGKEEP WEIFG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PW301e-43A0A2R6PW30_ACTCH; NAC domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13708311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.18e-08NAC domain containing protein 28