PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn062591
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 304aa    MW: 34057.6 Da    PI: 7.6722
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn062591genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY80.41.9e-25129190159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqKe+ +++fpr Y+rCt++   gC ++k+v++ +e+p++ +itY g+H+++
  Achn062591 129 MEDGHAWRKYGQKEILNAKFPRCYFRCTHKpdqGCLATKQVQKLQEEPHMYQITYFGHHTCT 190
                 58***************************9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.337124187IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-24124190IPR003657WRKY domain
SuperFamilySSF1182907.85E-24126190IPR003657WRKY domain
SMARTSM007746.3E-38129191IPR003657WRKY domain
PfamPF031063.3E-24130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MGTLRPEKLC ANRKRLMEEL VMGRDGAAQL RDLLEKPTGP GGSWPASAKG LVVKILGSFS  60
ASLSLLKCTS ETCEVCKIRA SVRVGSPSSG DRRSEDSGES SKRPAVKERR GCYKRRKTSD  120
TWMKILPTME DGHAWRKYGQ KEILNAKFPR CYFRCTHKPD QGCLATKQVQ KLQEEPHMYQ  180
ITYFGHHTCT NTLKISLECD PIKPYLLNFE SNNITSDQDH HHHPSYPISV KTECNKEETE  240
SNFSGKFPVV AAAAAAEPNM WADLLAMRSD HEDVISSTTT TSSHGLDMDF LNECVDFETD  300
FSW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-22125189468OsWRKY45
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028079122.13e-97WRKY DNA-binding transcription factor 70-like
TrEMBLA0A2R6RTB30.0A0A2R6RTB3_ACTCH; WRKY transcription factor 70
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-48WRKY DNA-binding protein 70