PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn070691
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 160aa    MW: 18074.6 Da    PI: 7.504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn070691genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.86.1e-21341562128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 p+Gf+F+Ptd++l+++yL +k+ gk+l++e +i e d+y+ +  +++ +   ++++++ yfF++ +kk+a   +  r++ +g W+++ + + + + +++
  Achn070691  34 PAGFKFRPTDQQLIHDYLVNKIVGKELPFEGIILERDVYDEKVlSEIFRsWNESGDTRSYFFTRLKKKAA---NYCRTIGNGAWRSQYS-RVINDGESN 128
                 89***************************999******987541333222455678899******99987...5899999*****8866.888888999 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 ++g+k+++ + +  +   ++ +W+m e++l
  Achn070691 129 TIGIKRSFEYMNIGS--VQHKKWIMMEFSL 156
                 **********95444..45899******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-1928157IPR003441NAC domain
PROSITE profilePS5100522.08133159IPR003441NAC domain
PfamPF023657.2E-1634156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MDINGNDADT SDNDGVGATT IVVIIFVSMA KTIPAGFKFR PTDQQLIHDY LVNKIVGKEL  60
PFEGIILERD VYDEKVLSEI FRSWNESGDT RSYFFTRLKK KAANYCRTIG NGAWRSQYSR  120
VINDGESNTI GIKRSFEYMN IGSVQHKKWI MMEFSLAGI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PEF31e-91A0A2R6PEF3_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.14e-13NAC domain containing protein 57