PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn075201
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 199aa    MW: 20394.5 Da    PI: 4.8064
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn075201genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.8e-193283155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr+++++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++++g
  Achn075201 32 PVYRGVRRRRSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALAMRG 83
                68*******************9.....4489************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.9E-133283IPR001471AP2/ERF domain
PROSITE profilePS5103222.8273391IPR001471AP2/ERF domain
SMARTSM003801.2E-333397IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.9E-303393IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-203393IPR016177DNA-binding domain
PRINTSPR003673.3E-83445IPR001471AP2/ERF domain
CDDcd000181.48E-224593No hitNo description
PRINTSPR003673.3E-87393IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MEHSSGGGWV GSTGGGRGNV AAGGARGSGR HPVYRGVRRR RSSGKWVSEI REPRSPNRIW  60
LGTFPTPEMA AVAYDVAALA MRGQDAELNF PNSASSLPVP ASMAPRDIQE AAASAAAAAG  120
AATDALAGST QAHLNETANP SAGGGGSEFV DEDLIFDMPN VLVNMAEGML LSPPRLDVAA  180
DHDTAAENAG DQNLWNFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-152493474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028069670.13e-81ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR03e-60ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2R6QW571e-139A0A2R6QW57_ACTCH; Ethylene-responsive transcription factor
STRINGXP_002528595.11e-72(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.11e-36ERF family protein