PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn075461
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 337aa    MW: 37869.2 Da    PI: 10.3376
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn075461genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.61.6e-10219238322
                 -SS-EEEEEEE--TT-SS-E CS
        WRKY   3 DgynWrKYGqKevkgsefpr 22 
                 D+y+WrKYGqK++kgs++pr
  Achn075461 219 DEYSWRKYGQKPIKGSPHPR 238
                 9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.5E-7193215IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.804.6E-10205239IPR003657WRKY domain
PROSITE profilePS5081112.105212281IPR003657WRKY domain
SuperFamilySSF1182901.44E-7215238IPR003657WRKY domain
SMARTSM007740.0012217259IPR003657WRKY domain
PfamPF031061.5E-6219238IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEEVEEANNV AVECSHRVLR LLSQPQDQTQ FRNLMVETGV AVSSFKRVVS LLDSGLGHAR  60
VRKLKKIQNA FPQSILLENQ ICKTDHQPKP VQLLQSNFLE NPIQEMGSLV KSSLTLGTPS  120
LDMTSNEQKP LQLAQKTPQP DYHNFFQQQQ QQRIQLQQQQ QQQMKQHAEM MYRRSNSGIS  180
LNFDSSTCTP TMSSTRKHRV NRSIKVPAIS NKLADIPPDE YSWRKYGQKP IKGSPHPRRG  240
DWHSGLERQT KVCRYGAKQK NFVVLGLSSG CTMKLRTDGS SKGNLGPAGN GALVMRDGCG  300
NKGGINKATS LEVEMRSVLR DLMIVKERNV YDLVQQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312371e-33KT031237.1 Glycine max clone HN_CCL_17 WRKY transcription factor (Glyma10g03820.2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028124442.14e-79probable WRKY transcription factor 21
TrEMBLA0A2R6QDX51e-118A0A2R6QDX5_ACTCH; WRKY transcription factor
STRINGXP_010038933.17e-68(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.24e-38WRKY DNA-binding protein 39