PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn078261
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 185aa    MW: 20381.4 Da    PI: 4.66
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn078261genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94e-0720432448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W+ Ia++++ gRt++++k+ w+++l
       Achn078261 20 WSVIAAKLP-GRTDNEIKNVWHTHL 43
                     *********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.12E-71952IPR009057Homeodomain-like
PROSITE profilePS500906.0982043IPR017877Myb-like domain
CDDcd001678.89E-52043No hitNo description
Gene3DG3DSA:1.10.10.602.6E-112044IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MAASQSSQSY RNSSSSMVAW SVIAAKLPGR TDNEIKNVWH THLKKRVLKQ NHQATSTLET  60
KPQNYVKSEP LNYPIQVSPQ SPQHSSSTTT NSETTATTST NNDALNDFPE VDKDFWESVF  120
LANDSGETTN FPAGGGETQM EFQFSPLHGV EQVGGCNPGL RDCMDFWYNI FTTAGELPEL  180
PELF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028109725.11e-43transcription factor MYB14-like
TrEMBLA0A2R6PF721e-119A0A2R6PF72_ACTCH; Myb-related protein like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1737334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-13myb domain protein 14