PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn085011

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bZIP

Protein Properties

Length: 216aa MW: 24552.7 Da PI: 10.0116

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn085011	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.3	2.1e-10	19	63	2	46
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k l+ rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Achn085011 19 KNLRTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 63 789999*************************98888887776554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.9E-8	15	65	No hit	No description
SMART	SM00338	6.7E-7	18	81	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.4E-8	19	63	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.151	20	64	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.38E-7	22	65	No hit	No description
CDD	cd14708	9.00E-23	22	74	No hit	No description
PROSITE pattern	PS00036	0	25	40	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	9.2E-31	105	177	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MADISPRTDT STDADTEDKN LRTLRRLAQN REAARKSRLR KKAYVQQLES SRMKLTQLEQ 60 ELQRARQQGI FISSSGDQSQ SLSGNGALAF DVEYARWLEE HNRRINELRG AVNSHAGDGE 120 LRSIVDGILA HYDEIFRIKG DAAKADVFHI LSGMWKTPAE RCFLWLGGFR SSEILKFTAH 180 LSSISSIKDR VRHHSLDFKD CQKRTPQLPS FFTMN*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KC008715	0.0	KC008715.1 Camellia sinensis bZIP transcription factor family protein 5 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022885958.1	1e-117	transcription factor TGA2.2-like isoform X2
Swissprot	P23923	1e-100	HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBL	A0A2R6PFG1	1e-117	A0A2R6PFG1_ACTCH; Transcription factor like
STRING	Migut.F00128.1.p	1e-113	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA21364	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	7e-76	TGACG motif-binding factor 6

Publications ? help Back to Top
Tabata T,Nakayama T,Mikami K,Iwabuchi M HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143]