PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn105951
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 467aa    MW: 51881 Da    PI: 5.8473
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn105951genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.8e-12266311454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h   E++RR ++N +f  Lr l+P++     +K + a+i+  A+eYIk+L
  Achn105951 266 KHFPTEKQRRVHLNGKFTALRNLVPNP-----TKTDRASIVGDAIEYIKEL 311
                 68889**********************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.72E-15261328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.704262311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-12266319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.44E-11266315No hitNo description
PfamPF000101.4E-9266311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.4E-10268317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MYEESACFDP NTMQEGPSQD GFSQNPSFSM EELSYHQNPP PEAATTMEVE FHQQMGLDMA  60
TMESCYNTNN SNNLIDSTHL MQEVVLDSNH VLSYDHSNWD PNLNPNHHHH HQDLNHHVEI  120
PNGHYPNLIT HNSSIPDLLN LLHLPRCSPS SVLANSSLSF LSQAQKSGNF PPSFLGDFAL  180
SEPGSVSNLV YDPLFHLNLP PQPPLFRELF QSLPNGALFG GGGGLVDERE GSEGGRQFDN  240
GVLEFSREWD MNCMAKEGNG KGPAAKHFPT EKQRRVHLNG KFTALRNLVP NPTKTDRASI  300
VGDAIEYIKE LLRTVNELKI LVEKKRCGTD RSKRHKKEDG TAGNLESVNM LPDPDQSYNG  360
PSLRSSWLQR KSKNTEVDVR IIDDEVTIKL AQRKKINCLL IVSKVLDELQ LDIHHVAGGL  420
VGDNYSFLFN SKICEGSSVY ASAIANKLIE VVNQQYAAIP PSTSSY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028113214.10.0transcription factor bHLH91-like
RefseqXP_028113215.10.0transcription factor bHLH91-like
TrEMBLA0A2R6QKZ20.0A0A2R6QKZ2_ACTCH; Transcription factor bHLH91 like
STRINGVIT_15s0107g00380.t011e-158(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.11e-101bHLH family protein